LinkageTable< Type > Struct Template Reference

The linkage table: one entry per row, and the shared design matrix. More...

#include <linkage.hpp>

Public Attributes
const vector< int > &	process
const vector< int > &	param
const vector< int > &	species
const vector< int > &	sex
const vector< int > &	age_bin
const vector< int > &	fleet
const vector< int > &	X_col
const vector< int > &	link
const matrix< Type > &	X
const vector< Type > &	beta

Detailed Description

template<class Type>
struct LinkageTable< Type >

The linkage table: one entry per row, and the shared design matrix.

Holds references (to the DATA_ vectors and beta_linkage_eff), so building one copies nothing. Stratum ids are 1-based, with 0 meaning "every level".

Definition at line 96 of file linkage.hpp.

Member Data Documentation

age_bin

template<class Type>

const vector<int>& LinkageTable< Type >::age_bin

Definition at line 101 of file linkage.hpp.

Referenced by rceattle_apply_M_linkages().

beta

template<class Type>

const vector<Type>& LinkageTable< Type >::beta

Definition at line 106 of file linkage.hpp.

Referenced by rceattle_apply_growth_linkages(), rceattle_apply_M_linkages(), rceattle_apply_q_linkages(), rceattle_apply_recruitment_linkages(), and rceattle_apply_sel_linkages().

fleet

template<class Type>

const vector<int>& LinkageTable< Type >::fleet

Definition at line 102 of file linkage.hpp.

Referenced by rceattle_apply_q_linkages(), and rceattle_apply_sel_linkages().

link

template<class Type>

const vector<int>& LinkageTable< Type >::link

Definition at line 104 of file linkage.hpp.

Referenced by rceattle_apply_growth_linkages(), rceattle_apply_M_linkages(), rceattle_apply_q_linkages(), rceattle_apply_recruitment_linkages(), and rceattle_apply_sel_linkages().

param

template<class Type>

const vector<int>& LinkageTable< Type >::param

Definition at line 98 of file linkage.hpp.

Referenced by rceattle_apply_growth_linkages(), rceattle_apply_recruitment_linkages(), and rceattle_apply_sel_linkages().

process

template<class Type>

const vector<int>& LinkageTable< Type >::process

Definition at line 97 of file linkage.hpp.

Referenced by rceattle_apply_growth_linkages(), rceattle_apply_M_linkages(), rceattle_apply_q_linkages(), rceattle_apply_recruitment_linkages(), and rceattle_apply_sel_linkages().

sex

template<class Type>

const vector<int>& LinkageTable< Type >::sex

Definition at line 100 of file linkage.hpp.

Referenced by rceattle_apply_growth_linkages(), rceattle_apply_M_linkages(), and rceattle_apply_sel_linkages().

species

template<class Type>

const vector<int>& LinkageTable< Type >::species

Definition at line 99 of file linkage.hpp.

Referenced by rceattle_apply_growth_linkages(), rceattle_apply_M_linkages(), and rceattle_apply_recruitment_linkages().

X

template<class Type>

const matrix<Type>& LinkageTable< Type >::X

Definition at line 105 of file linkage.hpp.

Referenced by rceattle_apply_growth_linkages(), rceattle_apply_M_linkages(), rceattle_apply_q_linkages(), rceattle_apply_recruitment_linkages(), and rceattle_apply_sel_linkages().

X_col

template<class Type>

const vector<int>& LinkageTable< Type >::X_col

Definition at line 103 of file linkage.hpp.

Referenced by rceattle_apply_growth_linkages(), rceattle_apply_M_linkages(), rceattle_apply_q_linkages(), rceattle_apply_recruitment_linkages(), and rceattle_apply_sel_linkages().

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The documentation for this struct was generated from the following file:

• src/TMB/linkage.hpp