query nmfs longine survey specimen data (age, length, weight, sex, maturity). only available for sablefish!

longline database documentation available on akfin

Usage

q_lls_sable_specimen(
  year,
  area = c("goa", "bs", "ai"),
  use_historical = FALSE,
  db = akfin,
  print_sql = FALSE,
  save = TRUE
)

Arguments

year: max year to retrieve data from
area: options are 'goa', 'bs', 'ai', or a combo. default=c('goa', 'bs', 'ai')
use_historical: T/F include historical Japanese survey data in the results (default: false)
db: the database to query (akfin)
print_sql: outputs the sql query instead of calling the data (default: false) - save must be false
save: save the file in designated folder, if FALSE outputs to global environment

Value

saves lls sablefish specimen data as data/raw/lls_specimen_data.csv or outputs to the global environment. also saves a copy of the SQL code used for the query and stores it in the data/sql folder.

Details

source table on akfin: afsc.lls_age_view

Examples

if (FALSE) { # \dontrun{
# sablefish specimen data in 1996 (first year ages were collected in the goa domestic survey) 
# in the gulf of alaska

q_lls_specimen(year=2000, area="goa", db=db)
} # }